BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020A07SP1|AL427558
(976 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1342 0.0
3x_Contig1461 350 4e-96
3x_Contig76 209 1e-53
>3x_Contig1530
Length = 6216
Score = 1342 bits (675), Expect = 0.0
Identities = 880/943 (93%), Gaps = 7/943 (0%)
Strand = Plus / Minus
Query: 1 acgtcgaaggcncagatttcaaatttgagcttttagccgcttcactcgccgttactaagg 60
||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2207 acgtcgaagacgcagatttcaaatttgagctttt-gccgcttcactcgccgttactaagg 2149
Query: 61 caatcccggttggtttcttttcctccgcttattgatatgcttaagttcagcgggtattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2148 caatcccggttggtttcttttcctccgcttattgatatgcttaagttcagcgggtattcc 2089
Query: 121 tacctgatttgaggtcaaactttgagagttttgattaagccgtatgcctcaaggagacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2088 tacctgatttgaggtcaaactttgagagttttgattaagccgtatgcctcaaggagacaa 2029
Query: 181 acaccagcgagtctttataacacctataagctcattgaccctagcttaccacgaattggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2028 acaccagcgagtctttataacacctataagctcattgaccctagcttaccacgaattggc 1969
Query: 241 gcaaacctaagacgtagatgtgcaagagtcgagtccatagacttgacacgcagccctgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1968 gcaaacctaagacgtagatgtgcaagagtcgagtccatagacttgacacgcagccctgct 1909
Query: 301 cacgcagaaggcaacggctagccactttcaagttaacccgaaaaacgagtatcactcact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1908 cacgcagaaggcaacggctagccactttcaagttaacccgaaaaacgagtatcactcact 1849
Query: 361 accaaacccaaaggtttgagagagaaatgacgctcaaacaggcatg-ccccctggaatac 419
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1848 accaaacccaaaggtttgagagagaaatgacgctcaaacaggcatgcccccctggaatac 1789
Query: 420 cagagggcgcaatgtgcgttcaaagatttgatgattcacgaaaatctgcaattcacaata 479
|||||||||||||||||||||||||||||||||||| | |||||| || |||| | ||||
Sbjct: 1788 cagagggcgcaatgtgcgttcaaagatttgatgatttaagaaaatatgaaattaaaaata 1729
Query: 480 catatcgcaattcgctgcgttcttcatcgatgcgagaaccaagagatccgttgttgaaag 539
|||| |||||| | || ||| || || |||||||||| ||||||| |||||||||||
Sbjct: 1728 aatatagcaattaggtgggttatttatagatgcgagaaaaaagagataagttgttgaaag 1669
Query: 540 ttttgaatattaaatttcttgataaatagtttttcataatgcaaaatgttgtttgtgttt 599
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1668 ttttgaatattaaatttattgataaatagtttttgataatgcaaaatgttgtttgtgttt 1609
Query: 600 atgtccactggagagacgagctctccagggaagtagttcatagagaaaaaactccattgt 659
|||| |||||||||| ||||| | |||||||||||| |||||||||||| | |||||
Sbjct: 1608 atgttaactggagagaagagctttttagggaagtagtttatagagaaaaaaatttattgt 1549
Query: 660 gtttaggatgagagadagadaactgatagcagaaaatcaagaattagccgcgcaattaag 719
||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||||
Sbjct: 1548 gtttaggatgagagaaagaaaattgatagcagaaaattaagaattagccgcgcaattaag 1489
Query: 720 cgcaggccatattcagcgattcccccagtaatctactcattcataatctttaatgatcct 779
||||||| ||||| |||||||||||||||||| |||| ||| ||||| ||||||||| |
Sbjct: 1488 cgcaggcgatatttagcgattcccccagtaatttacttatttataatatttaatgatagt 1429
Query: 780 tccgcagtctcacctwacggaaaccttgttacgacttttagttcctctaaatgacccaag 839
||||||| |||| |||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 1428 tccgcaggttcac--tacggaaaccttgttacgaattttagttcctctaaatga-ccaag 1372
Query: 840 tttgaccagattcttcgctctgagatggagttgcccccttctctaagcaaatcctgaggc 899
|||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1371 tttgaccagatttttcgctctgagatggagttgcccccttctctaagcaaatagtgaggc 1312
Query: 900 -tcactaagc-attcaatcggtactagcgacgggcggtgtgta 940
||| ||||| ||| ||| |||| |||||| ||||||||||||
Sbjct: 1311 gtcaataagcgattaaataggtaatagcgaagggcggtgtgta 1269
>3x_Contig1461
Length = 5478
Score = 350 bits (176), Expect = 4e-96
Identities = 275/295 (93%), Gaps = 12/295 (4%)
Strand = Plus / Plus
Query: 686 tagcagaaaatcaagaattagccgcgcaattaagcgcaggccatattcagcgattccccc 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tagcagaaaatcaagaattagccgcgcaattaagcgcaggccatattcagcgattccccc 217
Query: 746 agtaatctactcattcataatctttaatgatccttccgcagtctcacctwacggaaacct 805
|||| |||||||||| ||| |||| ||||||||| |||||| |||| ||||||||||
Sbjct: 218 agta-tctactcatt-ata-tctt-aatgatcct-ccgcaggttcac--tacggaaacct 270
Query: 806 tgttacgacttttagttcctctaaatgacccaagtttgaccagattcttcgctctgagat 865
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 271 tgttacgacttttagttcctctaaatgaccaatgtttgaccagattcttcgctctgagat 330
Query: 866 ggagttgcccccttctctaagcaaatcctgagg-ctcactaag-cattcaatcggtacta 923
||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 331 ggagttgcccccttccctaagcaaatcctgaggcctcactaagccattcaatcggtacta 390
Query: 924 gcgacgggcggtgtgtay-aaggggagggacgtaatc-acgc-agctgatgactt 975
||||||||||||||||| ||||| |||||||||||| |||| ||||||||||||
Sbjct: 391 gcgacgggcggtgtgtacaaagggcagggacgtaatcaacgcaagctgatgactt 445
>3x_Contig76
Length = 894
Score = 209 bits (105), Expect = 1e-53
Identities = 454/569 (79%), Gaps = 1/569 (0%)
Strand = Plus / Minus
Query: 40 cttcactcgccgttactaaggcaatcccggttggtttcttttcctccgcttattgatatg 99
|||||||| || ||||||| ||||||| || ||||||||||||| |||||| ||||
Sbjct: 582 cttcactctcctttactaattcaatccctttttttttcttttcctcctcttatttatatt 523
Query: 100 cttaagttcagcgggtattcctacctgatttgaggtcaaactttgagagttttgattaag 159
||||| |||| | ||||||||||| |||| | ||||||||| | | |||| |||||
Sbjct: 522 cttaatttcatcttttattcctaccttattttatttcaaacttttatattttttattaat 463
Query: 160 ccgtatgcctcaaggagacaaacaccagcgagtctttataacacctataagctcattgac 219
|| ||| |||||| | |||||||||| | | |||||||||||||||||| |||||| ||
Sbjct: 462 ccttattcctcaattatacaaacaccatctattctttataacacctataatctcatttac 403
Query: 220 cctagcttaccacgaattggcgcaaacctaagacgtagatgtgcaagagtcgagtccata 279
|||| |||||||| |||| | ||||||||| || || || | ||| | || | ||||||
Sbjct: 402 cctatcttaccactaattttctcaaacctaatacttatattttcaatattctattccata 343
Query: 280 gacttgacacgcagccctgctcacgcagaaggcaacggctagccactttcaagttaaccc 339
|||| |||| || |||| |||| || || |||| ||| |||||||||| |||||||
Sbjct: 342 tactttacactcatccctt-tcactcataattcaacttctatccactttcaatttaaccc 284
Query: 340 gaaaaacgagtatcactcactaccaaacccaaaggtttgagagagaaatgacgctcaaac 399
|||||| | ||||||||||||||||||||||| ||| | | | |||| || |||||||
Sbjct: 283 taaaaactattatcactcactaccaaacccaaattttttatatataaattactctcaaac 224
Query: 400 aggcatgccccctggaataccagagggcgcaatgtgcgttcaaagatttgatgattcacg 459
| ||| |||||| ||||||| | | |||| | | |||||| |||| || ||||||
Sbjct: 223 attcattccccctttaataccatatttctcaattttctttcaaatattttattattcact 164
Query: 460 aaaatctgcaattcacaatacatatcgcaattcgctgcgttcttcatcgatgcgagaacc 519
||||||| |||||||||||||||||| |||||| || | ||||||||| || | | ||||
Sbjct: 163 aaaatcttcaattcacaatacatatctcaattctcttctttcttcatctattctataacc 104
Query: 520 aagagatccgttgttgaaagttttgaatattaaatttcttgataaatagtttttcataat 579
|| | |||| || || ||| |||| ||||||||||||||| ||||||| |||||||||||
Sbjct: 103 aatatatcctttttttaaattttttaatattaaatttctttataaatattttttcataat 44
Query: 580 gcaaaatgttgtttgtgtttatgtccact 608
|||||| || ||| | ||||| ||||||
Sbjct: 43 tcaaaattttttttttttttatttccact 15
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5466
Number of Sequences: 1807
Number of extensions: 5466
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 3
length of query: 976
length of database: 10,358,551
effective HSP length: 16
effective length of query: 960
effective length of database: 10,329,639
effective search space: 9916453440
effective search space used: 9916453440
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)